SELECT 
  product_prices.product_id, 
  MIN(
    IF(
      product_prices.percentage_discount = 0, 
      product_prices.price, 
      product_prices.price - (
        product_prices.price * product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  product_prices 
WHERE 
  product_prices.product_id IN (
    268444, 268430, 268431, 268435, 268428, 
    268443, 268441, 268445, 268433, 268448, 
    268446, 268427
  ) 
  AND product_prices.lower_limit = 1 
  AND product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  product_prices.product_id

Query time 0.00079

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "9.36"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 12,
        "rows_produced_per_join": 1,
        "filtered": "10.00",
        "index_condition": "(`goimagine`.`product_prices`.`product_id` in (268444,268430,268431,268435,268428,268443,268441,268445,268433,268448,268446,268427))",
        "cost_info": {
          "read_cost": "9.24",
          "eval_cost": "0.12",
          "prefix_cost": "9.36",
          "data_read_per_join": "28"
        },
        "used_columns": [
          "id",
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`goimagine`.`product_prices`.`lower_limit` = 1) and (`goimagine`.`product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
268427 23.00000000
268428 8.99000000
268430 25.00000000
268431 39.00000000
268433 50.00000000
268435 50.00000000
268441 6.00000000
268443 75.00000000
268444 125.00000000
268445 49.00000000
268446 49.00000000
268448 49.00000000